Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Gm43341-201ENSMUST00000200104 1308 ntBASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Gm44090-201ENSMUST00000204669 1834 ntBASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Gm15103-201ENSMUST00000119893 871 ntBASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Gm23884-201ENSMUST00000122687 294 ntBASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Gm5866-201ENSMUST00000177881 973 ntBASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Gm24694-201ENSMUST00000180054 110 ntBASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Gm27663-201ENSMUST00000184839 110 ntBASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Gm18382-201ENSMUST00000194394 582 ntBASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Gm7730-201ENSMUST00000212486 454 ntBASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 CT030652.1-201ENSMUST00000227377 1235 ntBASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Zfp850-201ENSMUST00000099111 941 ntBASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Mterf1a-201ENSMUST00000044746 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdhb20Q91XZ9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Gm16215-201ENSMUST00000161990 637 ntBASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Gm19885-201ENSMUST00000212853 343 ntBASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 AC158392.1-201ENSMUST00000223720 1069 ntBASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb20Q91XZ9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms