Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Rubie-203ENSMUST00000227803 2430 ntBASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Gm5354-201ENSMUST00000182417 973 ntBASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ddx41Q91VN6 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Ddx41Q91VN6 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ddx41Q91VN6 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx41Q91VN6 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx41Q91VN6 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.71■□□□□ 0.11
Ddx41Q91VN6 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx41Q91VN6 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx41Q91VN6 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx41Q91VN6 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Ddx41Q91VN6 Gm11478-201ENSMUST00000117851 599 ntBASIC15.71■□□□□ 0.11
Ddx41Q91VN6 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ddx41Q91VN6 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx41Q91VN6 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx41Q91VN6 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx41Q91VN6 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ddx41Q91VN6 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx41Q91VN6 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx41Q91VN6 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx41Q91VN6 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx41Q91VN6 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx41Q91VN6 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.71■□□□□ 0.1
Ddx41Q91VN6 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx41Q91VN6 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms