Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Tram1Q91V04 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Tram1Q91V04 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.78□□□□□ -0.52
Tram1Q91V04 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Tram1Q91V04 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.78□□□□□ -0.52
Tram1Q91V04 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.78□□□□□ -0.52
Tram1Q91V04 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Gm29741-201ENSMUST00000192667 421 ntBASIC11.78□□□□□ -0.52
Tram1Q91V04 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.78□□□□□ -0.52
Tram1Q91V04 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.78□□□□□ -0.52
Tram1Q91V04 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Tram1Q91V04 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tram1Q91V04 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tram1Q91V04 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Tram1Q91V04 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tram1Q91V04 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Tram1Q91V04 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Tram1Q91V04 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tram1Q91V04 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tram1Q91V04 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.77□□□□□ -0.53
Tram1Q91V04 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Tram1Q91V04 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Tram1Q91V04 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Tram1Q91V04 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Tram1Q91V04 Gm7153-201ENSMUST00000117092 455 ntBASIC11.77□□□□□ -0.53
Tram1Q91V04 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.77□□□□□ -0.53
Tram1Q91V04 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.77□□□□□ -0.53
Tram1Q91V04 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Tram1Q91V04 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Tram1Q91V04 Gm27920-201ENSMUST00000183953 96 ntBASIC11.77□□□□□ -0.53
Tram1Q91V04 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Tram1Q91V04 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.77□□□□□ -0.53
Tram1Q91V04 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Tram1Q91V04 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.77□□□□□ -0.53
Tram1Q91V04 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tram1Q91V04 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Tram1Q91V04 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Tram1Q91V04 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tram1Q91V04 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Tram1Q91V04 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.76□□□□□ -0.53
Tram1Q91V04 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tram1Q91V04 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Tram1Q91V04 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.76□□□□□ -0.53
Tram1Q91V04 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tram1Q91V04 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tram1Q91V04 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.76□□□□□ -0.53
Tram1Q91V04 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms