Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Gm15487-201ENSMUST00000122373 465 ntBASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Gm9063-201ENSMUST00000223299 582 ntBASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4aQ8VEJ9 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Gm14928-201ENSMUST00000120198 477 ntBASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4aQ8VEJ9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Gm15957-201ENSMUST00000118893 974 ntBASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Gm44344-201ENSMUST00000200287 129 ntBASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Gm44608-201ENSMUST00000206827 855 ntBASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Gm25857-201ENSMUST00000082788 129 ntBASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4aQ8VEJ9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms