Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rprd1aQ8VDS4 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Gm27772-201ENSMUST00000184900 187 ntBASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Gm15823-201ENSMUST00000064305 670 ntBASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rprd1aQ8VDS4 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Gm18624-201ENSMUST00000220966 658 ntBASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rprd1aQ8VDS4 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.09□□□□□ -0.15
Rprd1aQ8VDS4 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms