Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf39Q8K2Z2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf39Q8K2Z2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf39Q8K2Z2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf39Q8K2Z2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf39Q8K2Z2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Gm15770-201ENSMUST00000117498 584 ntBASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf39Q8K2Z2 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf39Q8K2Z2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf39Q8K2Z2 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.21□□□□□ -0.14
Prpf39Q8K2Z2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.21□□□□□ -0.14
Prpf39Q8K2Z2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf39Q8K2Z2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf39Q8K2Z2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Gm5279-201ENSMUST00000199575 745 ntBASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Gm7730-201ENSMUST00000212486 454 ntBASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Prpf39Q8K2Z2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 229 ms