Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Gm21854-201ENSMUST00000179901 471 ntBASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Gm29741-201ENSMUST00000192667 421 ntBASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Gm20445-201ENSMUST00000061905 565 ntBASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rfwd3Q8CIK8 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rfwd3Q8CIK8 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rfwd3Q8CIK8 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rfwd3Q8CIK8 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Gm6912-201ENSMUST00000117218 544 ntBASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Gm27437-201ENSMUST00000183429 107 ntBASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.88□□□□□ -0.35
Rfwd3Q8CIK8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms