Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ube3dQ8BX13 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Gm8584-201ENSMUST00000171982 758 ntBASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube3dQ8BX13 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 BC001981-202ENSMUST00000191393 1545 ntBASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Gm7488-201ENSMUST00000117148 684 ntBASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 Gm24694-201ENSMUST00000180054 110 ntBASIC12.18□□□□□ -0.46
Ube3dQ8BX13 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ube3dQ8BX13 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms