Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm8131-201ENSMUST00000213783 1570 ntBASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm15770-201ENSMUST00000117498 584 ntBASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm8463-201ENSMUST00000208573 613 ntBASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm24447-201ENSMUST00000083977 338 ntBASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13□□□□□ -0.33
Cdk5rap1Q8BTW8 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm4984-201ENSMUST00000115987 360 ntBASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm12928-201ENSMUST00000117115 573 ntBASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm13689-201ENSMUST00000119360 685 ntBASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm15824-201ENSMUST00000119516 955 ntBASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm17150-201ENSMUST00000165577 381 ntBASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm44397-201ENSMUST00000195950 113 ntBASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdk5rap1Q8BTW8 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdk5rap1Q8BTW8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms