Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Cpsf4Q8BQZ5 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Mir7684-201ENSMUST00000183858 60 ntBASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 AA619741-201ENSMUST00000195095 646 ntBASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4Q8BQZ5 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Gm15957-201ENSMUST00000118893 974 ntBASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Gm15653-201ENSMUST00000119247 907 ntBASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Gm6916-202ENSMUST00000205523 195 ntBASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cpsf4Q8BQZ5 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms