Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ubp1Q811S7 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Gm28760-201ENSMUST00000185995 736 ntBASIC13.53□□□□□ -0.24
Ubp1Q811S7 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Gm42612-201ENSMUST00000197986 623 ntBASIC13.53□□□□□ -0.24
Ubp1Q811S7 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Gm43170-201ENSMUST00000199827 612 ntBASIC13.53□□□□□ -0.24
Ubp1Q811S7 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ubp1Q811S7 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.52□□□□□ -0.24
Ubp1Q811S7 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.52□□□□□ -0.24
Ubp1Q811S7 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ubp1Q811S7 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.24
Ubp1Q811S7 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ubp1Q811S7 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ubp1Q811S7 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Ubp1Q811S7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ubp1Q811S7 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ubp1Q811S7 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ubp1Q811S7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ubp1Q811S7 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ubp1Q811S7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ubp1Q811S7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ubp1Q811S7 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubp1Q811S7 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.52□□□□□ -0.25
Ubp1Q811S7 Mir698-201ENSMUST00000102164 109 ntBASIC13.52□□□□□ -0.25
Ubp1Q811S7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
Ubp1Q811S7 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Ubp1Q811S7 Gm5866-201ENSMUST00000177881 973 ntBASIC13.52□□□□□ -0.25
Ubp1Q811S7 Gm2445-201ENSMUST00000182798 989 ntBASIC13.52□□□□□ -0.25
Ubp1Q811S7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.52□□□□□ -0.25
Ubp1Q811S7 Gm5425-201ENSMUST00000214125 459 ntBASIC13.52□□□□□ -0.25
Ubp1Q811S7 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.52□□□□□ -0.25
Ubp1Q811S7 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubp1Q811S7 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubp1Q811S7 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.52□□□□□ -0.25
Ubp1Q811S7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubp1Q811S7 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubp1Q811S7 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubp1Q811S7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.52□□□□□ -0.25
Ubp1Q811S7 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubp1Q811S7 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubp1Q811S7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubp1Q811S7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubp1Q811S7 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubp1Q811S7 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubp1Q811S7 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubp1Q811S7 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.52□□□□□ -0.25
Ubp1Q811S7 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubp1Q811S7 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubp1Q811S7 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.51□□□□□ -0.25
Ubp1Q811S7 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ubp1Q811S7 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.51□□□□□ -0.25
Ubp1Q811S7 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Gm6912-201ENSMUST00000117218 544 ntBASIC13.51□□□□□ -0.25
Ubp1Q811S7 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.51□□□□□ -0.25
Ubp1Q811S7 Gm7430-201ENSMUST00000193824 1144 ntBASIC13.51□□□□□ -0.25
Ubp1Q811S7 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubp1Q811S7 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms