Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Gm14719-201ENSMUST00000121891 340 ntBASIC13.36□□□□□ -0.27
Trim50Q810I2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim50Q810I2 Gm9522-201ENSMUST00000182394 926 ntBASIC13.36□□□□□ -0.27
Trim50Q810I2 Gm29667-201ENSMUST00000190817 490 ntBASIC13.36□□□□□ -0.27
Trim50Q810I2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.36□□□□□ -0.27
Trim50Q810I2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim50Q810I2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim50Q810I2 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim50Q810I2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim50Q810I2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Trim50Q810I2 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim50Q810I2 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim50Q810I2 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim50Q810I2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim50Q810I2 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.36□□□□□ -0.27
Trim50Q810I2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim50Q810I2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim50Q810I2 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Trim50Q810I2 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim50Q810I2 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim50Q810I2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim50Q810I2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim50Q810I2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.35□□□□□ -0.27
Trim50Q810I2 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.35□□□□□ -0.27
Trim50Q810I2 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.35□□□□□ -0.27
Trim50Q810I2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Gm15240-201ENSMUST00000118156 720 ntBASIC13.35□□□□□ -0.27
Trim50Q810I2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.35□□□□□ -0.27
Trim50Q810I2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim50Q810I2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim50Q810I2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trim50Q810I2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Trim50Q810I2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim50Q810I2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim50Q810I2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim50Q810I2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim50Q810I2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim50Q810I2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim50Q810I2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim50Q810I2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim50Q810I2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim50Q810I2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim50Q810I2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim50Q810I2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim50Q810I2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim50Q810I2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim50Q810I2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.34□□□□□ -0.27
Trim50Q810I2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Trim50Q810I2 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.34□□□□□ -0.27
Trim50Q810I2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim50Q810I2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim50Q810I2 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.34□□□□□ -0.27
Trim50Q810I2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim50Q810I2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim50Q810I2 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.34□□□□□ -0.27
Trim50Q810I2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim50Q810I2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trim50Q810I2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim50Q810I2 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim50Q810I2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
Trim50Q810I2 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trim50Q810I2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim50Q810I2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim50Q810I2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim50Q810I2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim50Q810I2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim50Q810I2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim50Q810I2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim50Q810I2 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim50Q810I2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim50Q810I2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms