Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Gm9333-201ENSMUST00000205452 1323 ntBASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Trnp1Q80ZI1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Gm10434-201ENSMUST00000101158 471 ntBASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.29■□□□□ 0.04
Trnp1Q80ZI1 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC15.28■□□□□ 0.04
Trnp1Q80ZI1 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.28■□□□□ 0.04
Trnp1Q80ZI1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trnp1Q80ZI1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trnp1Q80ZI1 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trnp1Q80ZI1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trnp1Q80ZI1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trnp1Q80ZI1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trnp1Q80ZI1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trnp1Q80ZI1 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trnp1Q80ZI1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trnp1Q80ZI1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.28■□□□□ 0.04
Trnp1Q80ZI1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trnp1Q80ZI1 Gm4909-201ENSMUST00000118749 794 ntBASIC15.28■□□□□ 0.04
Trnp1Q80ZI1 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC15.28■□□□□ 0.04
Trnp1Q80ZI1 Mir5120-201ENSMUST00000175020 78 ntBASIC15.28■□□□□ 0.04
Trnp1Q80ZI1 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC15.28■□□□□ 0.04
Trnp1Q80ZI1 Mir6979-201ENSMUST00000183927 56 ntBASIC15.28■□□□□ 0.04
Trnp1Q80ZI1 Gm30285-201ENSMUST00000214614 422 ntBASIC15.28■□□□□ 0.04
Trnp1Q80ZI1 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC15.28■□□□□ 0.04
Trnp1Q80ZI1 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trnp1Q80ZI1 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms