Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Usp6nlQ80XC3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Usp6nlQ80XC3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Usp6nlQ80XC3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Usp6nlQ80XC3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Usp6nlQ80XC3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp6nlQ80XC3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp6nlQ80XC3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.08■□□□□ 0
Usp6nlQ80XC3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp6nlQ80XC3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Usp6nlQ80XC3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Usp6nlQ80XC3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.08■□□□□ 0
Usp6nlQ80XC3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.08■□□□□ 0
Usp6nlQ80XC3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Usp6nlQ80XC3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.08■□□□□ 0
Usp6nlQ80XC3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp6nlQ80XC3 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp6nlQ80XC3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp6nlQ80XC3 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.08■□□□□ 0
Usp6nlQ80XC3 Snora73a-201ENSMUST00000082453 205 ntBASIC15.08■□□□□ 0
Usp6nlQ80XC3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Usp6nlQ80XC3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp6nlQ80XC3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Usp6nlQ80XC3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Usp6nlQ80XC3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp6nlQ80XC3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.08■□□□□ 0
Usp6nlQ80XC3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp6nlQ80XC3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Usp6nlQ80XC3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Gm14723-201ENSMUST00000118686 215 ntBASIC15.07■□□□□ 0
Usp6nlQ80XC3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Gm8584-201ENSMUST00000171982 758 ntBASIC15.07■□□□□ 0
Usp6nlQ80XC3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.07■□□□□ 0
Usp6nlQ80XC3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Usp6nlQ80XC3 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.07■□□□□ 0
Usp6nlQ80XC3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.06■□□□□ 0
Usp6nlQ80XC3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Gm15770-201ENSMUST00000117498 584 ntBASIC15.06■□□□□ 0
Usp6nlQ80XC3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.06■□□□□ 0
Usp6nlQ80XC3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Gm43118-201ENSMUST00000199149 775 ntBASIC15.06■□□□□ 0
Usp6nlQ80XC3 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.06■□□□□ 0
Usp6nlQ80XC3 Gm45930-201ENSMUST00000221330 292 ntBASIC15.06■□□□□ 0
Usp6nlQ80XC3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Usp6nlQ80XC3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms