Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Gm4984-201ENSMUST00000115987 360 ntBASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Gm13829-201ENSMUST00000119600 138 ntBASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.51□□□□□ -0.25
Pcdh8Q7TSK3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Gm27892-201ENSMUST00000185017 106 ntBASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Gm6266-201ENSMUST00000203844 806 ntBASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Gm19078-201ENSMUST00000206311 727 ntBASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Gm18062-201ENSMUST00000208020 547 ntBASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Gm18055-201ENSMUST00000208254 547 ntBASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Gm5035-201ENSMUST00000215581 927 ntBASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.5□□□□□ -0.25
Pcdh8Q7TSK3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms