Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.05□□□□□ -0.32
Nr1h4Q60641 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.05□□□□□ -0.32
Nr1h4Q60641 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.05□□□□□ -0.32
Nr1h4Q60641 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nr1h4Q60641 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.04□□□□□ -0.32
Nr1h4Q60641 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nr1h4Q60641 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.04□□□□□ -0.32
Nr1h4Q60641 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Gm45453-201ENSMUST00000211758 853 ntBASIC13.04□□□□□ -0.32
Nr1h4Q60641 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.04□□□□□ -0.32
Nr1h4Q60641 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.04□□□□□ -0.32
Nr1h4Q60641 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nr1h4Q60641 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.04□□□□□ -0.32
Nr1h4Q60641 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nr1h4Q60641 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nr1h4Q60641 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Gm12260-201ENSMUST00000122447 411 ntBASIC13.03□□□□□ -0.32
Nr1h4Q60641 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Rprl2-201ENSMUST00000157150 290 ntBASIC13.03□□□□□ -0.32
Nr1h4Q60641 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.03□□□□□ -0.32
Nr1h4Q60641 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Gm6443-201ENSMUST00000203599 874 ntBASIC13.03□□□□□ -0.32
Nr1h4Q60641 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms