Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Gm9899-201ENSMUST00000065519 555 ntBASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shroom1Q5SX79 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Gm7287-201ENSMUST00000205267 602 ntBASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shroom1Q5SX79 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Gm15376-201ENSMUST00000122258 783 ntBASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Gm8584-201ENSMUST00000171982 758 ntBASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shroom1Q5SX79 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Acot6-202ENSMUST00000222921 3622 ntBASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shroom1Q5SX79 Gm12390-201ENSMUST00000117897 397 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms