Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps54Q5SPW0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Gm12403-201ENSMUST00000121384 959 ntBASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Gm15429-201ENSMUST00000151268 798 ntBASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.41■□□□□ 0.22
Vps54Q5SPW0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Vps54Q5SPW0 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps54Q5SPW0 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms