Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Gm27772-201ENSMUST00000184900 187 ntBASIC12.61□□□□□ -0.39
Urb1Q571H0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Urb1Q571H0 Gm43818-201ENSMUST00000200605 466 ntBASIC12.61□□□□□ -0.39
Urb1Q571H0 Gm29705-201ENSMUST00000212598 474 ntBASIC12.61□□□□□ -0.39
Urb1Q571H0 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Urb1Q571H0 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.61□□□□□ -0.39
Urb1Q571H0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Urb1Q571H0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Urb1Q571H0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Urb1Q571H0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.61□□□□□ -0.39
Urb1Q571H0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Urb1Q571H0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Urb1Q571H0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Urb1Q571H0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Urb1Q571H0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Urb1Q571H0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Urb1Q571H0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.61□□□□□ -0.39
Urb1Q571H0 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Urb1Q571H0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Urb1Q571H0 Gm12203-201ENSMUST00000118235 598 ntBASIC12.6□□□□□ -0.39
Urb1Q571H0 Gm12209-201ENSMUST00000120089 596 ntBASIC12.6□□□□□ -0.39
Urb1Q571H0 Gm13385-201ENSMUST00000121089 220 ntBASIC12.6□□□□□ -0.39
Urb1Q571H0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.6□□□□□ -0.39
Urb1Q571H0 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.6□□□□□ -0.39
Urb1Q571H0 Gm6334-201ENSMUST00000207083 228 ntBASIC12.6□□□□□ -0.39
Urb1Q571H0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.6□□□□□ -0.39
Urb1Q571H0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Urb1Q571H0 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.6□□□□□ -0.39
Urb1Q571H0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.6□□□□□ -0.39
Urb1Q571H0 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.6□□□□□ -0.39
Urb1Q571H0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.6□□□□□ -0.39
Urb1Q571H0 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.6□□□□□ -0.39
Urb1Q571H0 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.6□□□□□ -0.39
Urb1Q571H0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.6□□□□□ -0.39
Urb1Q571H0 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Urb1Q571H0 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Urb1Q571H0 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Urb1Q571H0 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Urb1Q571H0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Mir686-201ENSMUST00000102174 109 ntBASIC12.59□□□□□ -0.39
Urb1Q571H0 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Urb1Q571H0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Urb1Q571H0 Gm37714-201ENSMUST00000194742 342 ntBASIC12.59□□□□□ -0.39
Urb1Q571H0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Urb1Q571H0 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.59□□□□□ -0.39
Urb1Q571H0 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.59□□□□□ -0.39
Urb1Q571H0 Gm1335-201ENSMUST00000121653 386 ntBASIC12.59□□□□□ -0.39
Urb1Q571H0 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Gm8927-201ENSMUST00000181978 981 ntBASIC12.59□□□□□ -0.39
Urb1Q571H0 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.59□□□□□ -0.39
Urb1Q571H0 Gm3222-201ENSMUST00000071282 990 ntBASIC12.59□□□□□ -0.39
Urb1Q571H0 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Urb1Q571H0 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.59□□□□□ -0.39
Urb1Q571H0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms