Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Mir7654-201ENSMUST00000185082 70 ntBASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.68■□□□□ 0.1
Ckap2Q3V1H1 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Gm38144-201ENSMUST00000192790 465 ntBASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Gm37917-201ENSMUST00000194711 392 ntBASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Gm45668-201ENSMUST00000211271 493 ntBASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ckap2Q3V1H1 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Gm15823-201ENSMUST00000064305 670 ntBASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms