Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3b2Q3UJB0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3b2Q3UJB0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sf3b2Q3UJB0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 Gm16479-201ENSMUST00000121706 932 ntBASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 Gm3508-201ENSMUST00000186012 792 ntBASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 Gm10109-202ENSMUST00000206890 1211 ntBASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Sf3b2Q3UJB0 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sf3b2Q3UJB0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sf3b2Q3UJB0 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sf3b2Q3UJB0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.58■□□□□ 0.41
Sf3b2Q3UJB0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Sf3b2Q3UJB0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sf3b2Q3UJB0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sf3b2Q3UJB0 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Gm12616-201ENSMUST00000118594 382 ntBASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Gm12624-201ENSMUST00000177615 382 ntBASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Gm12621-201ENSMUST00000177760 382 ntBASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Gm12615-201ENSMUST00000177970 382 ntBASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Gm12622-201ENSMUST00000177975 382 ntBASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Gm12627-201ENSMUST00000178412 382 ntBASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Gm12625-201ENSMUST00000179122 382 ntBASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Gm12614-201ENSMUST00000179586 382 ntBASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Gm12613-201ENSMUST00000180323 382 ntBASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Gm13097-201ENSMUST00000210722 397 ntBASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 AC126253.1-202ENSMUST00000226732 835 ntBASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sf3b2Q3UJB0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Gm16202-201ENSMUST00000117532 544 ntBASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Gm26185-201ENSMUST00000157692 266 ntBASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Gm27023-201ENSMUST00000182372 285 ntBASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Gm18556-201ENSMUST00000219748 1031 ntBASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sf3b2Q3UJB0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Gm5846-201ENSMUST00000193146 1414 ntBASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms