Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Gm27321-201ENSMUST00000185021 205 ntBASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Gm43703-201ENSMUST00000200523 763 ntBASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.91□□□□□ -0.34
Brf2Q3UAW9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Brf2Q3UAW9 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.9□□□□□ -0.34
Brf2Q3UAW9 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Brf2Q3UAW9 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.35
Brf2Q3UAW9 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Brf2Q3UAW9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Brf2Q3UAW9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Gm24420-201ENSMUST00000176676 59 ntBASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms