Protein–RNA interactions for Protein: Q08874

Mitf, Microphthalmia-associated transcription factor, mousemouse

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MitfQ08874 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MitfQ08874 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
MitfQ08874 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MitfQ08874 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
MitfQ08874 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
MitfQ08874 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
MitfQ08874 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.67□□□□□ -0.38
MitfQ08874 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MitfQ08874 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
MitfQ08874 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MitfQ08874 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.66□□□□□ -0.38
MitfQ08874 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
MitfQ08874 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.66□□□□□ -0.38
MitfQ08874 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.66□□□□□ -0.38
MitfQ08874 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.66□□□□□ -0.38
MitfQ08874 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.66□□□□□ -0.38
MitfQ08874 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
MitfQ08874 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
MitfQ08874 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
MitfQ08874 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
MitfQ08874 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.66□□□□□ -0.38
MitfQ08874 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
MitfQ08874 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.66□□□□□ -0.38
MitfQ08874 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
MitfQ08874 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
MitfQ08874 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
MitfQ08874 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
MitfQ08874 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MitfQ08874 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.65□□□□□ -0.38
MitfQ08874 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.65□□□□□ -0.38
MitfQ08874 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MitfQ08874 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.65□□□□□ -0.38
MitfQ08874 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.65□□□□□ -0.38
MitfQ08874 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
MitfQ08874 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
MitfQ08874 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
MitfQ08874 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
MitfQ08874 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.65□□□□□ -0.38
MitfQ08874 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MitfQ08874 Rubie-203ENSMUST00000227803 2430 ntBASIC12.65□□□□□ -0.38
MitfQ08874 Gm15957-201ENSMUST00000118893 974 ntBASIC12.65□□□□□ -0.38
MitfQ08874 Gm11594-201ENSMUST00000122313 162 ntBASIC12.65□□□□□ -0.38
MitfQ08874 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MitfQ08874 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
MitfQ08874 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
MitfQ08874 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MitfQ08874 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.65□□□□□ -0.38
MitfQ08874 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MitfQ08874 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MitfQ08874 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MitfQ08874 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
MitfQ08874 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MitfQ08874 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
MitfQ08874 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
MitfQ08874 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MitfQ08874 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
MitfQ08874 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.65□□□□□ -0.38
MitfQ08874 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
MitfQ08874 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
MitfQ08874 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
MitfQ08874 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
MitfQ08874 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
MitfQ08874 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
MitfQ08874 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
MitfQ08874 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Gm14494-201ENSMUST00000118786 435 ntBASIC12.64□□□□□ -0.39
MitfQ08874 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.64□□□□□ -0.39
MitfQ08874 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.64□□□□□ -0.39
MitfQ08874 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.64□□□□□ -0.39
MitfQ08874 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.64□□□□□ -0.39
MitfQ08874 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms