Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.78□□□□□ -0.2
Pfdn6Q03958 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.78□□□□□ -0.2
Pfdn6Q03958 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.78□□□□□ -0.2
Pfdn6Q03958 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pfdn6Q03958 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Pfdn6Q03958 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pfdn6Q03958 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pfdn6Q03958 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pfdn6Q03958 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pfdn6Q03958 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pfdn6Q03958 Gm13453-201ENSMUST00000118708 357 ntBASIC13.77□□□□□ -0.21
Pfdn6Q03958 Gm13616-201ENSMUST00000120600 222 ntBASIC13.77□□□□□ -0.21
Pfdn6Q03958 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Pfdn6Q03958 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pfdn6Q03958 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pfdn6Q03958 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pfdn6Q03958 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pfdn6Q03958 Gm17837-201ENSMUST00000186435 985 ntBASIC13.77□□□□□ -0.21
Pfdn6Q03958 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pfdn6Q03958 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.77□□□□□ -0.21
Pfdn6Q03958 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.77□□□□□ -0.21
Pfdn6Q03958 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pfdn6Q03958 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pfdn6Q03958 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pfdn6Q03958 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pfdn6Q03958 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pfdn6Q03958 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pfdn6Q03958 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pfdn6Q03958 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pfdn6Q03958 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Pfdn6Q03958 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.76□□□□□ -0.21
Pfdn6Q03958 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pfdn6Q03958 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Gm27680-201ENSMUST00000184192 160 ntBASIC13.76□□□□□ -0.21
Pfdn6Q03958 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.76□□□□□ -0.21
Pfdn6Q03958 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Gm6888-201ENSMUST00000221983 706 ntBASIC13.76□□□□□ -0.21
Pfdn6Q03958 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Pfdn6Q03958 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pfdn6Q03958 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pfdn6Q03958 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pfdn6Q03958 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pfdn6Q03958 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pfdn6Q03958 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.75□□□□□ -0.21
Pfdn6Q03958 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pfdn6Q03958 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pfdn6Q03958 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pfdn6Q03958 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pfdn6Q03958 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pfdn6Q03958 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms