Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.62□□□□□ -0.07
VcpQ01853 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.62□□□□□ -0.07
VcpQ01853 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.62□□□□□ -0.07
VcpQ01853 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.62□□□□□ -0.07
VcpQ01853 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
VcpQ01853 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VcpQ01853 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VcpQ01853 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
VcpQ01853 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VcpQ01853 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VcpQ01853 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VcpQ01853 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
VcpQ01853 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VcpQ01853 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VcpQ01853 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VcpQ01853 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VcpQ01853 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
VcpQ01853 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 BC001981-202ENSMUST00000191393 1545 ntBASIC14.61□□□□□ -0.07
VcpQ01853 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
VcpQ01853 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.61□□□□□ -0.07
VcpQ01853 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
VcpQ01853 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.61□□□□□ -0.07
VcpQ01853 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.61□□□□□ -0.07
VcpQ01853 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
VcpQ01853 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.61□□□□□ -0.07
VcpQ01853 Gm27839-201ENSMUST00000184242 106 ntBASIC14.61□□□□□ -0.07
VcpQ01853 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.61□□□□□ -0.07
VcpQ01853 AA619741-201ENSMUST00000195095 646 ntBASIC14.61□□□□□ -0.07
VcpQ01853 Gm6916-202ENSMUST00000205523 195 ntBASIC14.61□□□□□ -0.07
VcpQ01853 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.61□□□□□ -0.07
VcpQ01853 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.61□□□□□ -0.07
VcpQ01853 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
VcpQ01853 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.61□□□□□ -0.07
VcpQ01853 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.61□□□□□ -0.07
VcpQ01853 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VcpQ01853 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
VcpQ01853 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VcpQ01853 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
VcpQ01853 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
VcpQ01853 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VcpQ01853 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VcpQ01853 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.6□□□□□ -0.07
VcpQ01853 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VcpQ01853 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
VcpQ01853 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VcpQ01853 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.6□□□□□ -0.07
VcpQ01853 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.6□□□□□ -0.07
VcpQ01853 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VcpQ01853 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VcpQ01853 Gm13226-201ENSMUST00000117838 404 ntBASIC14.6□□□□□ -0.07
VcpQ01853 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.6□□□□□ -0.07
VcpQ01853 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
VcpQ01853 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VcpQ01853 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.6□□□□□ -0.07
VcpQ01853 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.6□□□□□ -0.07
VcpQ01853 Gm9229-201ENSMUST00000222777 126 ntBASIC14.6□□□□□ -0.07
VcpQ01853 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VcpQ01853 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
VcpQ01853 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
VcpQ01853 Gm5356-201ENSMUST00000093326 615 ntBASIC14.6□□□□□ -0.07
VcpQ01853 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
VcpQ01853 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VcpQ01853 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VcpQ01853 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VcpQ01853 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VcpQ01853 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VcpQ01853 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.6□□□□□ -0.07
VcpQ01853 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
VcpQ01853 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.6□□□□□ -0.07
VcpQ01853 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
VcpQ01853 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
VcpQ01853 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VcpQ01853 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
VcpQ01853 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VcpQ01853 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
VcpQ01853 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms