Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Smn1P97801 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.74□□□□□ -0.53
Smn1P97801 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Smn1P97801 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smn1P97801 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smn1P97801 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smn1P97801 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smn1P97801 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smn1P97801 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Smn1P97801 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smn1P97801 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smn1P97801 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.73□□□□□ -0.53
Smn1P97801 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.73□□□□□ -0.53
Smn1P97801 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Smn1P97801 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.73□□□□□ -0.53
Smn1P97801 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.73□□□□□ -0.53
Smn1P97801 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smn1P97801 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.73□□□□□ -0.53
Smn1P97801 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smn1P97801 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smn1P97801 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smn1P97801 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.73□□□□□ -0.53
Smn1P97801 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smn1P97801 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smn1P97801 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smn1P97801 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smn1P97801 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Smn1P97801 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Smn1P97801 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smn1P97801 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.72□□□□□ -0.53
Smn1P97801 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Smn1P97801 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Smn1P97801 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 BC001981-202ENSMUST00000191393 1545 ntBASIC11.72□□□□□ -0.53
Smn1P97801 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.72□□□□□ -0.53
Smn1P97801 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 Gm6222-201ENSMUST00000120787 396 ntBASIC11.72□□□□□ -0.53
Smn1P97801 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.72□□□□□ -0.53
Smn1P97801 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.72□□□□□ -0.53
Smn1P97801 Gm11025-201ENSMUST00000140773 466 ntBASIC11.72□□□□□ -0.53
Smn1P97801 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.72□□□□□ -0.53
Smn1P97801 Gm9727-201ENSMUST00000161387 555 ntBASIC11.72□□□□□ -0.53
Smn1P97801 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.72□□□□□ -0.53
Smn1P97801 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.72□□□□□ -0.53
Smn1P97801 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Smn1P97801 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.72□□□□□ -0.53
Smn1P97801 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Smn1P97801 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.72□□□□□ -0.53
Smn1P97801 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Smn1P97801 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Smn1P97801 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Smn1P97801 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.72□□□□□ -0.53
Smn1P97801 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Smn1P97801 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.72□□□□□ -0.53
Smn1P97801 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smn1P97801 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Smn1P97801 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smn1P97801 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smn1P97801 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smn1P97801 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Smn1P97801 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smn1P97801 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms