Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Gm12091-201ENSMUST00000146791 830 ntBASIC12.96□□□□□ -0.33
Nkx3-2P97503 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Mir7654-201ENSMUST00000185082 70 ntBASIC12.96□□□□□ -0.33
Nkx3-2P97503 Gm9908-201ENSMUST00000211534 448 ntBASIC12.96□□□□□ -0.33
Nkx3-2P97503 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.96□□□□□ -0.33
Nkx3-2P97503 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Nkx3-2P97503 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx3-2P97503 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx3-2P97503 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.96□□□□□ -0.34
Nkx3-2P97503 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Nkx3-2P97503 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx3-2P97503 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx3-2P97503 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx3-2P97503 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nkx3-2P97503 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Nkx3-2P97503 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Gm12341-201ENSMUST00000119724 503 ntBASIC12.95□□□□□ -0.34
Nkx3-2P97503 Gm24420-201ENSMUST00000176676 59 ntBASIC12.95□□□□□ -0.34
Nkx3-2P97503 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Gm45384-201ENSMUST00000210451 277 ntBASIC12.95□□□□□ -0.34
Nkx3-2P97503 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.95□□□□□ -0.34
Nkx3-2P97503 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.95□□□□□ -0.34
Nkx3-2P97503 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nkx3-2P97503 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Rubie-203ENSMUST00000227803 2430 ntBASIC12.94□□□□□ -0.34
Nkx3-2P97503 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.94□□□□□ -0.34
Nkx3-2P97503 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.94□□□□□ -0.34
Nkx3-2P97503 Gm11478-201ENSMUST00000117851 599 ntBASIC12.94□□□□□ -0.34
Nkx3-2P97503 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Gm27701-201ENSMUST00000184498 110 ntBASIC12.94□□□□□ -0.34
Nkx3-2P97503 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nkx3-2P97503 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.94□□□□□ -0.34
Nkx3-2P97503 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms