Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.99□□□□□ -0.01
Lig3P97386 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Lig3P97386 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Lig3P97386 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Lig3P97386 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Gm12957-201ENSMUST00000117835 377 ntBASIC14.99□□□□□ -0.01
Lig3P97386 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Lig3P97386 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.99□□□□□ -0.01
Lig3P97386 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.99□□□□□ -0.01
Lig3P97386 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.99□□□□□ -0.01
Lig3P97386 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.99□□□□□ -0.01
Lig3P97386 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.99□□□□□ -0.01
Lig3P97386 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.99□□□□□ -0.01
Lig3P97386 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.99□□□□□ -0.01
Lig3P97386 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Gm27631-201ENSMUST00000184163 466 ntBASIC14.99□□□□□ -0.01
Lig3P97386 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.99□□□□□ -0.01
Lig3P97386 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.99□□□□□ -0.01
Lig3P97386 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.99□□□□□ -0.01
Lig3P97386 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Lig3P97386 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Lig3P97386 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lig3P97386 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Lig3P97386 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Lig3P97386 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Lig3P97386 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Lig3P97386 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.98□□□□□ -0.01
Lig3P97386 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Lig3P97386 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.98□□□□□ -0.01
Lig3P97386 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.98□□□□□ -0.01
Lig3P97386 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.98□□□□□ -0.01
Lig3P97386 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Lig3P97386 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.98□□□□□ -0.01
Lig3P97386 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Lig3P97386 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Lig3P97386 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lig3P97386 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lig3P97386 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig3P97386 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig3P97386 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig3P97386 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig3P97386 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.97□□□□□ -0.01
Lig3P97386 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig3P97386 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.97□□□□□ -0.01
Lig3P97386 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig3P97386 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Lig3P97386 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig3P97386 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig3P97386 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
Lig3P97386 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.97□□□□□ -0.01
Lig3P97386 Gm27701-201ENSMUST00000184498 110 ntBASIC14.97□□□□□ -0.01
Lig3P97386 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lig3P97386 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.97□□□□□ -0.01
Lig3P97386 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lig3P97386 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.97□□□□□ -0.01
Lig3P97386 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.97□□□□□ -0.01
Lig3P97386 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms