Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shox2P70390 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shox2P70390 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shox2P70390 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.53□□□□□ -0.24
Shox2P70390 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.53□□□□□ -0.24
Shox2P70390 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.53□□□□□ -0.24
Shox2P70390 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shox2P70390 Gm6550-201ENSMUST00000187574 993 ntBASIC13.53□□□□□ -0.24
Shox2P70390 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shox2P70390 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Shox2P70390 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Shox2P70390 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shox2P70390 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Shox2P70390 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shox2P70390 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shox2P70390 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Shox2P70390 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Shox2P70390 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Shox2P70390 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Shox2P70390 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Shox2P70390 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shox2P70390 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shox2P70390 Matn2-203ENSMUST00000226766 3252 ntBASIC13.52□□□□□ -0.24
Shox2P70390 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Shox2P70390 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shox2P70390 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shox2P70390 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Shox2P70390 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shox2P70390 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shox2P70390 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shox2P70390 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shox2P70390 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Shox2P70390 Gm7230-201ENSMUST00000173026 815 ntBASIC13.52□□□□□ -0.25
Shox2P70390 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Shox2P70390 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shox2P70390 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Shox2P70390 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.52□□□□□ -0.25
Shox2P70390 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.52□□□□□ -0.25
Shox2P70390 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shox2P70390 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shox2P70390 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shox2P70390 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Shox2P70390 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Shox2P70390 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shox2P70390 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Shox2P70390 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Shox2P70390 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shox2P70390 Paupar-201ENSMUST00000194826 3482 ntBASIC13.51□□□□□ -0.25
Shox2P70390 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shox2P70390 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shox2P70390 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shox2P70390 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shox2P70390 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.51□□□□□ -0.25
Shox2P70390 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shox2P70390 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.51□□□□□ -0.25
Shox2P70390 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shox2P70390 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shox2P70390 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shox2P70390 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shox2P70390 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shox2P70390 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shox2P70390 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shox2P70390 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shox2P70390 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shox2P70390 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shox2P70390 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.51□□□□□ -0.25
Shox2P70390 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.51□□□□□ -0.25
Shox2P70390 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shox2P70390 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shox2P70390 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Shox2P70390 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shox2P70390 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shox2P70390 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shox2P70390 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shox2P70390 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Shox2P70390 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shox2P70390 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shox2P70390 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shox2P70390 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shox2P70390 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.5□□□□□ -0.25
Shox2P70390 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.5□□□□□ -0.25
Shox2P70390 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shox2P70390 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shox2P70390 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shox2P70390 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shox2P70390 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shox2P70390 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shox2P70390 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.5□□□□□ -0.25
Shox2P70390 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shox2P70390 Gm27920-201ENSMUST00000183953 96 ntBASIC13.5□□□□□ -0.25
Shox2P70390 Gm27300-201ENSMUST00000184085 97 ntBASIC13.5□□□□□ -0.25
Shox2P70390 Gm27335-201ENSMUST00000184758 97 ntBASIC13.5□□□□□ -0.25
Shox2P70390 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.5□□□□□ -0.25
Shox2P70390 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Shox2P70390 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shox2P70390 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.5□□□□□ -0.25
Shox2P70390 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shox2P70390 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.5□□□□□ -0.25
Shox2P70390 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shox2P70390 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms