Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six5P70178 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six5P70178 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six5P70178 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Six5P70178 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Six5P70178 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.83□□□□□ -0.36
Six5P70178 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Six5P70178 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six5P70178 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Six5P70178 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Six5P70178 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.83□□□□□ -0.36
Six5P70178 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Six5P70178 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Six5P70178 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Six5P70178 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six5P70178 Gm17795-201ENSMUST00000214505 757 ntBASIC12.83□□□□□ -0.36
Six5P70178 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six5P70178 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.83□□□□□ -0.36
Six5P70178 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six5P70178 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six5P70178 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six5P70178 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six5P70178 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Six5P70178 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.83□□□□□ -0.36
Six5P70178 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Six5P70178 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Six5P70178 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six5P70178 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six5P70178 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six5P70178 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six5P70178 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.82□□□□□ -0.36
Six5P70178 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Six5P70178 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.82□□□□□ -0.36
Six5P70178 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Six5P70178 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Six5P70178 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Six5P70178 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Six5P70178 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six5P70178 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six5P70178 Gm22189-201ENSMUST00000103822 86 ntBASIC12.82□□□□□ -0.36
Six5P70178 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Six5P70178 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.82□□□□□ -0.36
Six5P70178 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six5P70178 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.82□□□□□ -0.36
Six5P70178 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.82□□□□□ -0.36
Six5P70178 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.82□□□□□ -0.36
Six5P70178 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Six5P70178 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six5P70178 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Six5P70178 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six5P70178 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six5P70178 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Six5P70178 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Six5P70178 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Six5P70178 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Six5P70178 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Six5P70178 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Six5P70178 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.81□□□□□ -0.36
Six5P70178 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six5P70178 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six5P70178 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Six5P70178 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six5P70178 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six5P70178 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six5P70178 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six5P70178 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Six5P70178 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.81□□□□□ -0.36
Six5P70178 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Six5P70178 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.81□□□□□ -0.36
Six5P70178 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.81□□□□□ -0.36
Six5P70178 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Six5P70178 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Six5P70178 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.81□□□□□ -0.36
Six5P70178 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.81□□□□□ -0.36
Six5P70178 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six5P70178 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.81□□□□□ -0.36
Six5P70178 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.81□□□□□ -0.36
Six5P70178 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six5P70178 Gm9797-201ENSMUST00000052902 613 ntBASIC12.81□□□□□ -0.36
Six5P70178 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six5P70178 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.81□□□□□ -0.36
Six5P70178 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Six5P70178 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six5P70178 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Six5P70178 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Six5P70178 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six5P70178 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Six5P70178 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six5P70178 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six5P70178 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Six5P70178 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Six5P70178 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Six5P70178 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Six5P70178 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Six5P70178 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six5P70178 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Six5P70178 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six5P70178 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Six5P70178 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Six5P70178 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms