Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.09■□□□□ 0.01
Hmgb1P63158 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb1P63158 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.09■□□□□ 0.01
Hmgb1P63158 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.09■□□□□ 0.01
Hmgb1P63158 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.09■□□□□ 0.01
Hmgb1P63158 Gm18041-201ENSMUST00000218210 618 ntBASIC15.09■□□□□ 0.01
Hmgb1P63158 Gm8396-201ENSMUST00000057361 823 ntBASIC15.09■□□□□ 0.01
Hmgb1P63158 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb1P63158 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb1P63158 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb1P63158 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb1P63158 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Hmgb1P63158 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb1P63158 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb1P63158 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb1P63158 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb1P63158 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.09■□□□□ 0.01
Hmgb1P63158 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgb1P63158 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hmgb1P63158 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Hmgb1P63158 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.08■□□□□ 0.01
Hmgb1P63158 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgb1P63158 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgb1P63158 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgb1P63158 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hmgb1P63158 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.08■□□□□ 0
Hmgb1P63158 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.08■□□□□ 0
Hmgb1P63158 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hmgb1P63158 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Hmgb1P63158 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hmgb1P63158 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.08■□□□□ 0
Hmgb1P63158 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.08■□□□□ 0
Hmgb1P63158 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.08■□□□□ 0
Hmgb1P63158 Gm5425-201ENSMUST00000214125 459 ntBASIC15.08■□□□□ 0
Hmgb1P63158 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgb1P63158 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgb1P63158 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgb1P63158 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgb1P63158 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hmgb1P63158 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.08■□□□□ 0
Hmgb1P63158 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.08■□□□□ 0
Hmgb1P63158 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.08■□□□□ 0
Hmgb1P63158 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Hmgb1P63158 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Hmgb1P63158 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.07■□□□□ 0
Hmgb1P63158 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.07■□□□□ 0
Hmgb1P63158 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.07■□□□□ 0
Hmgb1P63158 Gm15393-201ENSMUST00000120499 219 ntBASIC15.07■□□□□ 0
Hmgb1P63158 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.07■□□□□ 0
Hmgb1P63158 Gm6736-201ENSMUST00000166583 948 ntBASIC15.07■□□□□ 0
Hmgb1P63158 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.07■□□□□ 0
Hmgb1P63158 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.07■□□□□ 0
Hmgb1P63158 Gm27430-201ENSMUST00000184585 107 ntBASIC15.07■□□□□ 0
Hmgb1P63158 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.07■□□□□ 0
Hmgb1P63158 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Hmgb1P63158 Gm44333-201ENSMUST00000197168 107 ntBASIC15.07■□□□□ 0
Hmgb1P63158 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.07■□□□□ 0
Hmgb1P63158 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.07■□□□□ 0
Hmgb1P63158 Gm46209-201ENSMUST00000217912 553 ntBASIC15.07■□□□□ 0
Hmgb1P63158 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.07■□□□□ 0
Hmgb1P63158 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Hmgb1P63158 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgb1P63158 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Hmgb1P63158 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb1P63158 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb1P63158 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb1P63158 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hmgb1P63158 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hmgb1P63158 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb1P63158 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb1P63158 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgb1P63158 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.06■□□□□ 0
Hmgb1P63158 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Hmgb1P63158 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.06■□□□□ 0
Hmgb1P63158 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms