Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp46P62069 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Usp46P62069 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp46P62069 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp46P62069 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Usp46P62069 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp46P62069 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp46P62069 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp46P62069 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp46P62069 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp46P62069 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp46P62069 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp46P62069 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp46P62069 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Usp46P62069 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.39□□□□□ -0.11
Usp46P62069 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.39□□□□□ -0.11
Usp46P62069 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Usp46P62069 Gm24420-201ENSMUST00000176676 59 ntBASIC14.39□□□□□ -0.11
Usp46P62069 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Usp46P62069 Gm19078-201ENSMUST00000206311 727 ntBASIC14.39□□□□□ -0.11
Usp46P62069 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usp46P62069 Gm18307-201ENSMUST00000206864 949 ntBASIC14.39□□□□□ -0.11
Usp46P62069 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp46P62069 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.39□□□□□ -0.11
Usp46P62069 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp46P62069 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp46P62069 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp46P62069 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.39□□□□□ -0.11
Usp46P62069 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp46P62069 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp46P62069 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp46P62069 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp46P62069 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp46P62069 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp46P62069 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp46P62069 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp46P62069 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp46P62069 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp46P62069 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp46P62069 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Usp46P62069 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usp46P62069 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp46P62069 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp46P62069 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp46P62069 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.38□□□□□ -0.11
Usp46P62069 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usp46P62069 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp46P62069 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp46P62069 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp46P62069 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp46P62069 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp46P62069 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp46P62069 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.38□□□□□ -0.11
Usp46P62069 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.38□□□□□ -0.11
Usp46P62069 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp46P62069 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.38□□□□□ -0.11
Usp46P62069 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.38□□□□□ -0.11
Usp46P62069 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp46P62069 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp46P62069 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp46P62069 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp46P62069 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp46P62069 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp46P62069 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp46P62069 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp46P62069 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp46P62069 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Usp46P62069 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp46P62069 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.38□□□□□ -0.11
Usp46P62069 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
Usp46P62069 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp46P62069 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp46P62069 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp46P62069 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp46P62069 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp46P62069 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.37□□□□□ -0.11
Usp46P62069 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp46P62069 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Usp46P62069 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Usp46P62069 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Usp46P62069 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp46P62069 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Usp46P62069 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Usp46P62069 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.37□□□□□ -0.11
Usp46P62069 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp46P62069 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp46P62069 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Usp46P62069 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.37□□□□□ -0.11
Usp46P62069 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp46P62069 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.37□□□□□ -0.11
Usp46P62069 Gm27701-201ENSMUST00000184498 110 ntBASIC14.37□□□□□ -0.11
Usp46P62069 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp46P62069 Gm28911-201ENSMUST00000188837 117 ntBASIC14.37□□□□□ -0.11
Usp46P62069 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp46P62069 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.37□□□□□ -0.11
Usp46P62069 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp46P62069 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp46P62069 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.37□□□□□ -0.11
Usp46P62069 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp46P62069 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms