Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcl12P40224 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cxcl12P40224 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.02□□□□□ -0.17
Cxcl12P40224 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcl12P40224 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcl12P40224 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcl12P40224 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcl12P40224 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcl12P40224 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcl12P40224 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.02□□□□□ -0.17
Cxcl12P40224 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcl12P40224 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cxcl12P40224 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.01□□□□□ -0.17
Cxcl12P40224 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Cxcl12P40224 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Cxcl12P40224 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Cxcl12P40224 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Cxcl12P40224 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Gm24514-201ENSMUST00000174961 285 ntBASIC14.01□□□□□ -0.17
Cxcl12P40224 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.01□□□□□ -0.17
Cxcl12P40224 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.01□□□□□ -0.17
Cxcl12P40224 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Cxcl12P40224 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.01□□□□□ -0.17
Cxcl12P40224 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.01□□□□□ -0.17
Cxcl12P40224 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cxcl12P40224 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cxcl12P40224 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cxcl12P40224 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cxcl12P40224 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cxcl12P40224 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cxcl12P40224 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl12P40224 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl12P40224 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl12P40224 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cxcl12P40224 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl12P40224 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl12P40224 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl12P40224 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl12P40224 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cxcl12P40224 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cxcl12P40224 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14□□□□□ -0.17
Cxcl12P40224 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cxcl12P40224 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl12P40224 Gm16202-201ENSMUST00000117532 544 ntBASIC14□□□□□ -0.17
Cxcl12P40224 Gm14277-201ENSMUST00000121195 360 ntBASIC14□□□□□ -0.17
Cxcl12P40224 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cxcl12P40224 Gm26185-201ENSMUST00000157692 266 ntBASIC14□□□□□ -0.17
Cxcl12P40224 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14□□□□□ -0.17
Cxcl12P40224 Gm18584-201ENSMUST00000203098 964 ntBASIC14□□□□□ -0.17
Cxcl12P40224 Gm44069-201ENSMUST00000204898 506 ntBASIC14□□□□□ -0.17
Cxcl12P40224 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14□□□□□ -0.17
Cxcl12P40224 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14□□□□□ -0.17
Cxcl12P40224 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl12P40224 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl12P40224 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl12P40224 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl12P40224 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cxcl12P40224 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl12P40224 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cxcl12P40224 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cxcl12P40224 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Cxcl12P40224 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cxcl12P40224 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl12P40224 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Cxcl12P40224 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.99□□□□□ -0.17
Cxcl12P40224 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl12P40224 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl12P40224 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Cxcl12P40224 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.99□□□□□ -0.17
Cxcl12P40224 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl12P40224 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.99□□□□□ -0.17
Cxcl12P40224 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.99□□□□□ -0.17
Cxcl12P40224 Gm15782-201ENSMUST00000121073 445 ntBASIC13.99□□□□□ -0.17
Cxcl12P40224 Gm12566-201ENSMUST00000121479 359 ntBASIC13.99□□□□□ -0.17
Cxcl12P40224 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl12P40224 Gm22334-201ENSMUST00000158070 133 ntBASIC13.99□□□□□ -0.17
Cxcl12P40224 Gm24548-201ENSMUST00000158650 108 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms