Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
BdnfP21237 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BdnfP21237 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BdnfP21237 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.16□□□□□ -0.3
BdnfP21237 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.16□□□□□ -0.3
BdnfP21237 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.16□□□□□ -0.3
BdnfP21237 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.16□□□□□ -0.3
BdnfP21237 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.16□□□□□ -0.3
BdnfP21237 Gm44335-201ENSMUST00000196879 141 ntBASIC13.16□□□□□ -0.3
BdnfP21237 Gm44297-201ENSMUST00000198304 141 ntBASIC13.16□□□□□ -0.3
BdnfP21237 Gm44346-201ENSMUST00000198851 141 ntBASIC13.16□□□□□ -0.3
BdnfP21237 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.16□□□□□ -0.3
BdnfP21237 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BdnfP21237 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BdnfP21237 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BdnfP21237 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BdnfP21237 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
BdnfP21237 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BdnfP21237 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.16□□□□□ -0.3
BdnfP21237 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
BdnfP21237 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
BdnfP21237 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BdnfP21237 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
BdnfP21237 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BdnfP21237 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BdnfP21237 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BdnfP21237 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
BdnfP21237 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
BdnfP21237 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
BdnfP21237 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
BdnfP21237 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BdnfP21237 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BdnfP21237 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BdnfP21237 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
BdnfP21237 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
BdnfP21237 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
BdnfP21237 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.15□□□□□ -0.3
BdnfP21237 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
BdnfP21237 Gm13823-201ENSMUST00000119930 345 ntBASIC13.15□□□□□ -0.3
BdnfP21237 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.15□□□□□ -0.3
BdnfP21237 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BdnfP21237 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.15□□□□□ -0.3
BdnfP21237 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.15□□□□□ -0.3
BdnfP21237 Mir6990-201ENSMUST00000183724 91 ntBASIC13.15□□□□□ -0.3
BdnfP21237 Gm43125-201ENSMUST00000201724 730 ntBASIC13.15□□□□□ -0.3
BdnfP21237 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BdnfP21237 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BdnfP21237 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BdnfP21237 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
BdnfP21237 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BdnfP21237 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
BdnfP21237 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
BdnfP21237 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BdnfP21237 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BdnfP21237 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BdnfP21237 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
BdnfP21237 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.15□□□□□ -0.31
BdnfP21237 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
BdnfP21237 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
BdnfP21237 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
BdnfP21237 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.14□□□□□ -0.31
BdnfP21237 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
BdnfP21237 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
BdnfP21237 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 Gm6222-201ENSMUST00000120787 396 ntBASIC13.14□□□□□ -0.31
BdnfP21237 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 Gm18049-201ENSMUST00000208909 581 ntBASIC13.14□□□□□ -0.31
BdnfP21237 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.14□□□□□ -0.31
BdnfP21237 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
BdnfP21237 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.14□□□□□ -0.31
BdnfP21237 Gm18041-201ENSMUST00000218210 618 ntBASIC13.14□□□□□ -0.31
BdnfP21237 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.14□□□□□ -0.31
BdnfP21237 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.14□□□□□ -0.31
BdnfP21237 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
BdnfP21237 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.14□□□□□ -0.31
BdnfP21237 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.14□□□□□ -0.31
BdnfP21237 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
BdnfP21237 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
BdnfP21237 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms