Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.04□□□□□ -0.48
Ccl3P10855 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccl3P10855 Gm11793-201ENSMUST00000120433 981 ntBASIC12.04□□□□□ -0.48
Ccl3P10855 Gm13342-201ENSMUST00000121055 207 ntBASIC12.04□□□□□ -0.48
Ccl3P10855 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.04□□□□□ -0.48
Ccl3P10855 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Ccl3P10855 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Gm7029-201ENSMUST00000173226 450 ntBASIC12.04□□□□□ -0.48
Ccl3P10855 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccl3P10855 Gm38241-201ENSMUST00000192641 898 ntBASIC12.04□□□□□ -0.48
Ccl3P10855 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccl3P10855 Gm44364-201ENSMUST00000198368 141 ntBASIC12.04□□□□□ -0.48
Ccl3P10855 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.04□□□□□ -0.48
Ccl3P10855 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccl3P10855 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ccl3P10855 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.04□□□□□ -0.48
Ccl3P10855 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ccl3P10855 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Ccl3P10855 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccl3P10855 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.03□□□□□ -0.48
Ccl3P10855 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccl3P10855 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Ccl3P10855 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccl3P10855 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Ccl3P10855 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ccl3P10855 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.03□□□□□ -0.48
Ccl3P10855 Gm14350-201ENSMUST00000116642 640 ntBASIC12.03□□□□□ -0.48
Ccl3P10855 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.03□□□□□ -0.48
Ccl3P10855 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccl3P10855 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.03□□□□□ -0.48
Ccl3P10855 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccl3P10855 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.03□□□□□ -0.48
Ccl3P10855 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.03□□□□□ -0.48
Ccl3P10855 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccl3P10855 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.03□□□□□ -0.48
Ccl3P10855 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.03□□□□□ -0.48
Ccl3P10855 Gm18935-201ENSMUST00000212692 664 ntBASIC12.03□□□□□ -0.48
Ccl3P10855 Cts7-204ENSMUST00000225321 1257 ntBASIC12.03□□□□□ -0.48
Ccl3P10855 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Gm24526-201ENSMUST00000082921 158 ntBASIC12.03□□□□□ -0.48
Ccl3P10855 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccl3P10855 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.03□□□□□ -0.48
Ccl3P10855 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
Ccl3P10855 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccl3P10855 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccl3P10855 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccl3P10855 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Ccl3P10855 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccl3P10855 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
Ccl3P10855 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ccl3P10855 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccl3P10855 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ccl3P10855 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccl3P10855 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccl3P10855 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccl3P10855 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms