Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06344 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
P06344 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.2□□□□□ -0.46
P06344 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
P06344 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06344 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.2□□□□□ -0.46
P06344 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
P06344 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06344 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06344 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06344 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06344 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
P06344 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.2□□□□□ -0.46
P06344 Gm2445-201ENSMUST00000182798 989 ntBASIC12.2□□□□□ -0.46
P06344 Gm27772-201ENSMUST00000184900 187 ntBASIC12.2□□□□□ -0.46
P06344 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
P06344 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.2□□□□□ -0.46
P06344 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.2□□□□□ -0.46
P06344 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.2□□□□□ -0.46
P06344 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
P06344 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.2□□□□□ -0.46
P06344 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06344 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.2□□□□□ -0.46
P06344 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
P06344 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
P06344 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
P06344 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06344 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
P06344 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
P06344 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06344 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
P06344 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.2□□□□□ -0.46
P06344 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
P06344 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
P06344 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
P06344 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06344 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.19□□□□□ -0.46
P06344 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.19□□□□□ -0.46
P06344 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
P06344 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
P06344 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
P06344 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.19□□□□□ -0.46
P06344 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.19□□□□□ -0.46
P06344 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.19□□□□□ -0.46
P06344 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.19□□□□□ -0.46
P06344 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.19□□□□□ -0.46
P06344 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.19□□□□□ -0.46
P06344 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
P06344 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
P06344 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.19□□□□□ -0.46
P06344 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
P06344 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.19□□□□□ -0.46
P06344 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06344 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
P06344 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
P06344 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06344 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms