Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Gm15770-201ENSMUST00000117498 584 ntBASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Gm15487-201ENSMUST00000122373 465 ntBASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Gm21854-201ENSMUST00000179901 471 ntBASIC11.84□□□□□ -0.51
Igh-VJ558P01758 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Gm44872-201ENSMUST00000207864 420 ntBASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Gm17795-201ENSMUST00000214505 757 ntBASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Igh-VJ558P01758 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Igh-VJ558P01758 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Igh-VJ558P01758 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Igh-VJ558P01758 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Igh-VJ558P01758 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.83□□□□□ -0.52
Igh-VJ558P01758 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Gm29667-201ENSMUST00000190817 490 ntBASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Igh-VJ558P01758 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Igh-VJ558P01758 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms