Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.55□□□□□ -0.56
Ifna1P01572 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ifna1P01572 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Ifna1P01572 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.54□□□□□ -0.56
Ifna1P01572 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.54□□□□□ -0.56
Ifna1P01572 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Ifna1P01572 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.54□□□□□ -0.56
Ifna1P01572 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.54□□□□□ -0.56
Ifna1P01572 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.54□□□□□ -0.56
Ifna1P01572 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.54□□□□□ -0.56
Ifna1P01572 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.54□□□□□ -0.56
Ifna1P01572 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.54□□□□□ -0.56
Ifna1P01572 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.54□□□□□ -0.56
Ifna1P01572 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ifna1P01572 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.54□□□□□ -0.56
Ifna1P01572 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ifna1P01572 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ifna1P01572 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ifna1P01572 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.54□□□□□ -0.56
Ifna1P01572 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
Ifna1P01572 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ifna1P01572 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.53□□□□□ -0.56
Ifna1P01572 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Ifna1P01572 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.53□□□□□ -0.56
Ifna1P01572 Gm13823-201ENSMUST00000119930 345 ntBASIC11.53□□□□□ -0.56
Ifna1P01572 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.53□□□□□ -0.56
Ifna1P01572 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ifna1P01572 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.53□□□□□ -0.56
Ifna1P01572 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.53□□□□□ -0.56
Ifna1P01572 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.53□□□□□ -0.56
Ifna1P01572 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Ifna1P01572 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Ifna1P01572 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Ifna1P01572 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Ifna1P01572 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 BC001981-202ENSMUST00000191393 1545 ntBASIC11.53□□□□□ -0.56
Ifna1P01572 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ifna1P01572 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.53□□□□□ -0.56
Ifna1P01572 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.53□□□□□ -0.56
Ifna1P01572 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ifna1P01572 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.53□□□□□ -0.56
Ifna1P01572 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Ifna1P01572 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ifna1P01572 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ifna1P01572 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms