Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shoc2O88520 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shoc2O88520 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.17□□□□□ -0.14
Shoc2O88520 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shoc2O88520 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shoc2O88520 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shoc2O88520 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shoc2O88520 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shoc2O88520 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Shoc2O88520 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shoc2O88520 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shoc2O88520 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shoc2O88520 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shoc2O88520 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Shoc2O88520 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shoc2O88520 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shoc2O88520 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shoc2O88520 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shoc2O88520 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shoc2O88520 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.16□□□□□ -0.14
Shoc2O88520 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.16□□□□□ -0.14
Shoc2O88520 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.16□□□□□ -0.14
Shoc2O88520 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shoc2O88520 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shoc2O88520 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shoc2O88520 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shoc2O88520 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shoc2O88520 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shoc2O88520 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Shoc2O88520 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Shoc2O88520 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Shoc2O88520 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.15□□□□□ -0.14
Shoc2O88520 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Shoc2O88520 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.15□□□□□ -0.14
Shoc2O88520 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.15□□□□□ -0.14
Shoc2O88520 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Gm15393-201ENSMUST00000120499 219 ntBASIC14.15□□□□□ -0.14
Shoc2O88520 Gm14057-201ENSMUST00000120631 482 ntBASIC14.15□□□□□ -0.14
Shoc2O88520 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Shoc2O88520 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.15□□□□□ -0.14
Shoc2O88520 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.15□□□□□ -0.14
Shoc2O88520 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.15□□□□□ -0.14
Shoc2O88520 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.15□□□□□ -0.14
Shoc2O88520 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Shoc2O88520 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shoc2O88520 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Shoc2O88520 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shoc2O88520 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shoc2O88520 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shoc2O88520 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shoc2O88520 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shoc2O88520 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Shoc2O88520 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shoc2O88520 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shoc2O88520 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.14□□□□□ -0.15
Shoc2O88520 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Shoc2O88520 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.14□□□□□ -0.15
Shoc2O88520 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.14□□□□□ -0.15
Shoc2O88520 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Shoc2O88520 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.14□□□□□ -0.15
Shoc2O88520 Mir7684-201ENSMUST00000183858 60 ntBASIC14.14□□□□□ -0.15
Shoc2O88520 Gm21470-201ENSMUST00000187680 696 ntBASIC14.14□□□□□ -0.15
Shoc2O88520 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Shoc2O88520 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Shoc2O88520 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.14□□□□□ -0.15
Shoc2O88520 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.14□□□□□ -0.15
Shoc2O88520 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.14□□□□□ -0.15
Shoc2O88520 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shoc2O88520 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shoc2O88520 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shoc2O88520 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Shoc2O88520 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.14□□□□□ -0.15
Shoc2O88520 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shoc2O88520 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms