Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npc1O35604 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npc1O35604 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Npc1O35604 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npc1O35604 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npc1O35604 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Npc1O35604 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Npc1O35604 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npc1O35604 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npc1O35604 Gm13385-201ENSMUST00000121089 220 ntBASIC13.38□□□□□ -0.27
Npc1O35604 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.38□□□□□ -0.27
Npc1O35604 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.38□□□□□ -0.27
Npc1O35604 Gm29741-201ENSMUST00000192667 421 ntBASIC13.38□□□□□ -0.27
Npc1O35604 Gm45668-201ENSMUST00000211271 493 ntBASIC13.38□□□□□ -0.27
Npc1O35604 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.38□□□□□ -0.27
Npc1O35604 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npc1O35604 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npc1O35604 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npc1O35604 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npc1O35604 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npc1O35604 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Npc1O35604 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.38□□□□□ -0.27
Npc1O35604 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npc1O35604 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npc1O35604 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npc1O35604 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Npc1O35604 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npc1O35604 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npc1O35604 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Npc1O35604 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.38□□□□□ -0.27
Npc1O35604 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Npc1O35604 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
Npc1O35604 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Npc1O35604 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Npc1O35604 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Npc1O35604 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.37□□□□□ -0.27
Npc1O35604 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.37□□□□□ -0.27
Npc1O35604 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Npc1O35604 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Npc1O35604 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Npc1O35604 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.37□□□□□ -0.27
Npc1O35604 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Npc1O35604 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Npc1O35604 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Npc1O35604 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.37□□□□□ -0.27
Npc1O35604 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Npc1O35604 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Npc1O35604 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Npc1O35604 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.36□□□□□ -0.27
Npc1O35604 Gm8927-201ENSMUST00000181978 981 ntBASIC13.36□□□□□ -0.27
Npc1O35604 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.36□□□□□ -0.27
Npc1O35604 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.36□□□□□ -0.27
Npc1O35604 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 Gm3222-201ENSMUST00000071282 990 ntBASIC13.36□□□□□ -0.27
Npc1O35604 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Npc1O35604 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.36□□□□□ -0.27
Npc1O35604 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Npc1O35604 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms