Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.57□□□□□ -0.56
Prrt1O35449 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Prrt1O35449 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prrt1O35449 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prrt1O35449 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Prrt1O35449 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prrt1O35449 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.57□□□□□ -0.56
Prrt1O35449 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prrt1O35449 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prrt1O35449 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prrt1O35449 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.57□□□□□ -0.56
Prrt1O35449 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prrt1O35449 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.57□□□□□ -0.56
Prrt1O35449 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.57□□□□□ -0.56
Prrt1O35449 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prrt1O35449 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Prrt1O35449 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.57□□□□□ -0.56
Prrt1O35449 Gm6376-201ENSMUST00000209407 580 ntBASIC11.57□□□□□ -0.56
Prrt1O35449 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.56
Prrt1O35449 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.57□□□□□ -0.56
Prrt1O35449 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.57□□□□□ -0.56
Prrt1O35449 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prrt1O35449 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prrt1O35449 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prrt1O35449 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prrt1O35449 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prrt1O35449 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prrt1O35449 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prrt1O35449 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Prrt1O35449 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prrt1O35449 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prrt1O35449 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Prrt1O35449 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Prrt1O35449 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Prrt1O35449 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.56□□□□□ -0.56
Prrt1O35449 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Prrt1O35449 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.56□□□□□ -0.56
Prrt1O35449 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Prrt1O35449 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.56□□□□□ -0.56
Prrt1O35449 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.56□□□□□ -0.56
Prrt1O35449 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.56□□□□□ -0.56
Prrt1O35449 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Syt7-205ENSMUST00000224135 1557 ntBASIC11.56□□□□□ -0.56
Prrt1O35449 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.56□□□□□ -0.56
Prrt1O35449 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Prrt1O35449 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Prrt1O35449 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.56□□□□□ -0.56
Prrt1O35449 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Prrt1O35449 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Prrt1O35449 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prrt1O35449 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prrt1O35449 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prrt1O35449 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Prrt1O35449 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Prrt1O35449 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Prrt1O35449 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Prrt1O35449 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prrt1O35449 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prrt1O35449 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Prrt1O35449 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Prrt1O35449 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prrt1O35449 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prrt1O35449 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prrt1O35449 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prrt1O35449 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.55□□□□□ -0.56
Prrt1O35449 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Prrt1O35449 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Prrt1O35449 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Prrt1O35449 Gm27300-201ENSMUST00000184085 97 ntBASIC11.55□□□□□ -0.56
Prrt1O35449 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Prrt1O35449 Gm27335-201ENSMUST00000184758 97 ntBASIC11.55□□□□□ -0.56
Prrt1O35449 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.55□□□□□ -0.56
Prrt1O35449 Gm18669-201ENSMUST00000216049 778 ntBASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms