Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ebf3O08791 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.23□□□□□ -0.13
Ebf3O08791 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.23□□□□□ -0.13
Ebf3O08791 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ebf3O08791 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.23□□□□□ -0.13
Ebf3O08791 Gm19078-201ENSMUST00000206311 727 ntBASIC14.23□□□□□ -0.13
Ebf3O08791 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Gm6007-201ENSMUST00000208170 823 ntBASIC14.23□□□□□ -0.13
Ebf3O08791 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ebf3O08791 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ebf3O08791 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.23□□□□□ -0.13
Ebf3O08791 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ebf3O08791 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ebf3O08791 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.23□□□□□ -0.13
Ebf3O08791 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.22□□□□□ -0.13
Ebf3O08791 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.22□□□□□ -0.13
Ebf3O08791 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Gm15429-201ENSMUST00000151268 798 ntBASIC14.22□□□□□ -0.13
Ebf3O08791 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.22□□□□□ -0.13
Ebf3O08791 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Ebf3O08791 Gm2495-201ENSMUST00000191160 466 ntBASIC14.22□□□□□ -0.13
Ebf3O08791 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.22□□□□□ -0.13
Ebf3O08791 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.22□□□□□ -0.13
Ebf3O08791 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Ebf3O08791 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ebf3O08791 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.22□□□□□ -0.13
Ebf3O08791 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ebf3O08791 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.22□□□□□ -0.13
Ebf3O08791 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf3O08791 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf3O08791 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf3O08791 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ebf3O08791 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf3O08791 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.21□□□□□ -0.13
Ebf3O08791 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf3O08791 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf3O08791 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf3O08791 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ebf3O08791 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf3O08791 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ebf3O08791 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms