Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Gm8410-201ENSMUST00000117225 605 ntBASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.05□□□□□ -0.16
Pcdh9F8VPK8 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Gm27430-201ENSMUST00000184585 107 ntBASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Gm44333-201ENSMUST00000197168 107 ntBASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Gm9229-201ENSMUST00000222777 126 ntBASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Shd-206ENSMUST00000225145 998 ntBASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh9F8VPK8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Gm8927-201ENSMUST00000181978 981 ntBASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Gm27533-201ENSMUST00000183800 152 ntBASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.03□□□□□ -0.16
Pcdh9F8VPK8 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms