Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Gm45684-201ENSMUST00000210244 1571 ntBASIC16.38■□□□□ 0.21
Ube4aE9Q735 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ube4aE9Q735 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4aE9Q735 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.37■□□□□ 0.21
Ube4aE9Q735 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4aE9Q735 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Ube4aE9Q735 Mir1247-201ENSMUST00000116706 82 ntBASIC16.37■□□□□ 0.21
Ube4aE9Q735 Gm5940-201ENSMUST00000117582 1068 ntBASIC16.37■□□□□ 0.21
Ube4aE9Q735 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC16.37■□□□□ 0.21
Ube4aE9Q735 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4aE9Q735 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.37■□□□□ 0.21
Ube4aE9Q735 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.37■□□□□ 0.21
Ube4aE9Q735 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4aE9Q735 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC16.37■□□□□ 0.21
Ube4aE9Q735 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Ube4aE9Q735 Gm7399-201ENSMUST00000032395 858 ntBASIC16.37■□□□□ 0.21
Ube4aE9Q735 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4aE9Q735 Gm10268-201ENSMUST00000085340 555 ntBASIC16.37■□□□□ 0.21
Ube4aE9Q735 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ube4aE9Q735 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4aE9Q735 Gm11661-201ENSMUST00000121761 1327 ntBASIC16.37■□□□□ 0.21
Ube4aE9Q735 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.37■□□□□ 0.21
Ube4aE9Q735 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4aE9Q735 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ube4aE9Q735 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Ube4aE9Q735 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube4aE9Q735 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Gm6013-201ENSMUST00000212264 699 ntBASIC16.36■□□□□ 0.21
Ube4aE9Q735 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ube4aE9Q735 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4aE9Q735 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4aE9Q735 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4aE9Q735 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4aE9Q735 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4aE9Q735 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4aE9Q735 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC16.35■□□□□ 0.21
Ube4aE9Q735 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4aE9Q735 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC16.35■□□□□ 0.21
Ube4aE9Q735 Tyms-ps-201ENSMUST00000219550 915 ntBASIC16.35■□□□□ 0.21
Ube4aE9Q735 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4aE9Q735 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4aE9Q735 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4aE9Q735 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4aE9Q735 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4aE9Q735 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4aE9Q735 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4aE9Q735 Gm5620-201ENSMUST00000077991 1348 ntBASIC16.35■□□□□ 0.21
Ube4aE9Q735 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC16.35■□□□□ 0.21
Ube4aE9Q735 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Ube4aE9Q735 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4aE9Q735 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4aE9Q735 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4aE9Q735 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4aE9Q735 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4aE9Q735 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms