Protein–RNA interactions for Protein: B2RXZ1

Pnldc1, Poly(A)-specific ribonuclease PNLDC1, mousemouse

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pnldc1B2RXZ1 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pnldc1B2RXZ1 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Pnldc1B2RXZ1 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Pnldc1B2RXZ1 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Pnldc1B2RXZ1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Gm43438-201ENSMUST00000198133 379 ntBASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Gm9794-201ENSMUST00000202370 423 ntBASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Pnldc1B2RXZ1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Gm12585-201ENSMUST00000117307 290 ntBASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Gm7653-201ENSMUST00000214567 508 ntBASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pnldc1B2RXZ1 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pnldc1B2RXZ1 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pnldc1B2RXZ1 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pnldc1B2RXZ1 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.75□□□□□ -0.21
Pnldc1B2RXZ1 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Pnldc1B2RXZ1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pnldc1B2RXZ1 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pnldc1B2RXZ1 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pnldc1B2RXZ1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pnldc1B2RXZ1 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pnldc1B2RXZ1 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pnldc1B2RXZ1 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms