Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd3B1AR17 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd3B1AR17 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.38□□□□□ -0.27
Chd3B1AR17 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Chd3B1AR17 Gm13612-201ENSMUST00000119276 390 ntBASIC13.38□□□□□ -0.27
Chd3B1AR17 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.38□□□□□ -0.27
Chd3B1AR17 Gm43630-201ENSMUST00000201550 776 ntBASIC13.38□□□□□ -0.27
Chd3B1AR17 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.38□□□□□ -0.27
Chd3B1AR17 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chd3B1AR17 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.38□□□□□ -0.27
Chd3B1AR17 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd3B1AR17 Gm5161-201ENSMUST00000075243 853 ntBASIC13.38□□□□□ -0.27
Chd3B1AR17 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd3B1AR17 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd3B1AR17 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd3B1AR17 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd3B1AR17 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Chd3B1AR17 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd3B1AR17 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd3B1AR17 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd3B1AR17 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Chd3B1AR17 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd3B1AR17 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Chd3B1AR17 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd3B1AR17 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd3B1AR17 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.38□□□□□ -0.27
Chd3B1AR17 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.38□□□□□ -0.27
Chd3B1AR17 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd3B1AR17 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd3B1AR17 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chd3B1AR17 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.38□□□□□ -0.27
Chd3B1AR17 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.38□□□□□ -0.27
Chd3B1AR17 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.38□□□□□ -0.27
Chd3B1AR17 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.38□□□□□ -0.27
Chd3B1AR17 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chd3B1AR17 Gm37424-201ENSMUST00000191727 561 ntBASIC13.38□□□□□ -0.27
Chd3B1AR17 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.38□□□□□ -0.27
Chd3B1AR17 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.38□□□□□ -0.27
Chd3B1AR17 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd3B1AR17 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.38□□□□□ -0.27
Chd3B1AR17 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd3B1AR17 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd3B1AR17 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chd3B1AR17 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Chd3B1AR17 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd3B1AR17 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd3B1AR17 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd3B1AR17 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd3B1AR17 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd3B1AR17 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.37□□□□□ -0.27
Chd3B1AR17 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd3B1AR17 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd3B1AR17 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.37□□□□□ -0.27
Chd3B1AR17 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.37□□□□□ -0.27
Chd3B1AR17 Gm17330-201ENSMUST00000221047 165 ntBASIC13.37□□□□□ -0.27
Chd3B1AR17 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Chd3B1AR17 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chd3B1AR17 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd3B1AR17 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd3B1AR17 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chd3B1AR17 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chd3B1AR17 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Chd3B1AR17 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.37□□□□□ -0.27
Chd3B1AR17 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.37□□□□□ -0.27
Chd3B1AR17 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd3B1AR17 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd3B1AR17 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.36□□□□□ -0.27
Chd3B1AR17 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Chd3B1AR17 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.36□□□□□ -0.27
Chd3B1AR17 Gm17420-201ENSMUST00000164753 153 ntBASIC13.36□□□□□ -0.27
Chd3B1AR17 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.36□□□□□ -0.27
Chd3B1AR17 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.36□□□□□ -0.27
Chd3B1AR17 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd3B1AR17 Gm9899-201ENSMUST00000065519 555 ntBASIC13.36□□□□□ -0.27
Chd3B1AR17 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Chd3B1AR17 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Chd3B1AR17 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd3B1AR17 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.36□□□□□ -0.27
Chd3B1AR17 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chd3B1AR17 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd3B1AR17 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd3B1AR17 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Chd3B1AR17 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd3B1AR17 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd3B1AR17 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd3B1AR17 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd3B1AR17 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd3B1AR17 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Chd3B1AR17 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd3B1AR17 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd3B1AR17 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Chd3B1AR17 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chd3B1AR17 Gm4984-201ENSMUST00000115987 360 ntBASIC13.36□□□□□ -0.27
Chd3B1AR17 Gm15824-201ENSMUST00000119516 955 ntBASIC13.36□□□□□ -0.27
Chd3B1AR17 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chd3B1AR17 Gm8652-201ENSMUST00000181363 964 ntBASIC13.36□□□□□ -0.27
Chd3B1AR17 Gm17794-201ENSMUST00000220252 955 ntBASIC13.36□□□□□ -0.27
Chd3B1AR17 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd3B1AR17 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd3B1AR17 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms