Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a4A2AX52 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Gm7029-201ENSMUST00000173226 450 ntBASIC11.54□□□□□ -0.56
Col6a4A2AX52 Gm37714-201ENSMUST00000194742 342 ntBASIC11.54□□□□□ -0.56
Col6a4A2AX52 Gm9368-201ENSMUST00000219348 831 ntBASIC11.54□□□□□ -0.56
Col6a4A2AX52 Cts7-204ENSMUST00000225321 1257 ntBASIC11.54□□□□□ -0.56
Col6a4A2AX52 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.54□□□□□ -0.56
Col6a4A2AX52 Gm6023-201ENSMUST00000118217 606 ntBASIC11.54□□□□□ -0.56
Col6a4A2AX52 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Gm6621-201ENSMUST00000193251 772 ntBASIC11.54□□□□□ -0.56
Col6a4A2AX52 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.54□□□□□ -0.56
Col6a4A2AX52 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.54□□□□□ -0.56
Col6a4A2AX52 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Col6a4A2AX52 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a4A2AX52 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Mir877-201ENSMUST00000104738 85 ntBASIC11.53□□□□□ -0.56
Col6a4A2AX52 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.53□□□□□ -0.56
Col6a4A2AX52 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.53□□□□□ -0.56
Col6a4A2AX52 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.53□□□□□ -0.56
Col6a4A2AX52 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.53□□□□□ -0.56
Col6a4A2AX52 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.53□□□□□ -0.56
Col6a4A2AX52 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.53□□□□□ -0.56
Col6a4A2AX52 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.53□□□□□ -0.56
Col6a4A2AX52 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.53□□□□□ -0.56
Col6a4A2AX52 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.53□□□□□ -0.56
Col6a4A2AX52 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Col6a4A2AX52 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a4A2AX52 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms