Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Gm4984-201ENSMUST00000115987 360 ntBASIC14.26□□□□□ -0.13
Scn1aA2APX8 Gm12203-201ENSMUST00000118235 598 ntBASIC14.26□□□□□ -0.13
Scn1aA2APX8 Gm12209-201ENSMUST00000120089 596 ntBASIC14.26□□□□□ -0.13
Scn1aA2APX8 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1aA2APX8 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.26□□□□□ -0.13
Scn1aA2APX8 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.26□□□□□ -0.13
Scn1aA2APX8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.26□□□□□ -0.13
Scn1aA2APX8 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn1aA2APX8 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.25□□□□□ -0.13
Scn1aA2APX8 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.25□□□□□ -0.13
Scn1aA2APX8 Itm2b-204ENSMUST00000228637 783 ntBASIC14.25□□□□□ -0.13
Scn1aA2APX8 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn1aA2APX8 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Gm13829-201ENSMUST00000119600 138 ntBASIC14.24□□□□□ -0.13
Scn1aA2APX8 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.24□□□□□ -0.13
Scn1aA2APX8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.24□□□□□ -0.13
Scn1aA2APX8 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Gm14660-201ENSMUST00000119809 575 ntBASIC14.24□□□□□ -0.13
Scn1aA2APX8 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.24□□□□□ -0.13
Scn1aA2APX8 Gm27731-201ENSMUST00000185192 107 ntBASIC14.24□□□□□ -0.13
Scn1aA2APX8 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.24□□□□□ -0.13
Scn1aA2APX8 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn1aA2APX8 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn1aA2APX8 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn1aA2APX8 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms