Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.57■■□□□ 1.04
Vps35Q9EQH3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps35Q9EQH3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps35Q9EQH3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.56■■□□□ 1.04
Vps35Q9EQH3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps35Q9EQH3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps35Q9EQH3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps35Q9EQH3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vps35Q9EQH3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vps35Q9EQH3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Vps35Q9EQH3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps35Q9EQH3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps35Q9EQH3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps35Q9EQH3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.55■■□□□ 1.04
Vps35Q9EQH3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vps35Q9EQH3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vps35Q9EQH3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps35Q9EQH3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps35Q9EQH3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.54■■□□□ 1.04
Vps35Q9EQH3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps35Q9EQH3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps35Q9EQH3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.54■■□□□ 1.04
Vps35Q9EQH3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps35Q9EQH3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps35Q9EQH3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps35Q9EQH3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.53■■□□□ 1.04
Vps35Q9EQH3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps35Q9EQH3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps35Q9EQH3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.52■■□□□ 1.04
Vps35Q9EQH3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps35Q9EQH3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps35Q9EQH3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vps35Q9EQH3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps35Q9EQH3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps35Q9EQH3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Vps35Q9EQH3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps35Q9EQH3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Vps35Q9EQH3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps35Q9EQH3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.51■■□□□ 1.03
Vps35Q9EQH3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps35Q9EQH3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.51■■□□□ 1.03
Vps35Q9EQH3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.51■■□□□ 1.03
Vps35Q9EQH3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps35Q9EQH3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps35Q9EQH3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Vps35Q9EQH3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Vps35Q9EQH3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Vps35Q9EQH3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.49■■□□□ 1.03
Vps35Q9EQH3 Gm22567-201ENSMUST00000175542 342 ntBASIC21.49■■□□□ 1.03
Vps35Q9EQH3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vps35Q9EQH3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps35Q9EQH3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Vps35Q9EQH3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps35Q9EQH3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.48■■□□□ 1.03
Vps35Q9EQH3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Vps35Q9EQH3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps35Q9EQH3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.48■■□□□ 1.03
Vps35Q9EQH3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps35Q9EQH3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps35Q9EQH3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps35Q9EQH3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Vps35Q9EQH3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps35Q9EQH3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.47■■□□□ 1.03
Vps35Q9EQH3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps35Q9EQH3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps35Q9EQH3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps35Q9EQH3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps35Q9EQH3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Vps35Q9EQH3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Vps35Q9EQH3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.46■■□□□ 1.03
Vps35Q9EQH3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Vps35Q9EQH3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Vps35Q9EQH3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Vps35Q9EQH3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
Vps35Q9EQH3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vps35Q9EQH3 Gm5921-201ENSMUST00000075898 882 ntBASIC21.45■■□□□ 1.02
Vps35Q9EQH3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vps35Q9EQH3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vps35Q9EQH3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Vps35Q9EQH3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vps35Q9EQH3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vps35Q9EQH3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vps35Q9EQH3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Vps35Q9EQH3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Vps35Q9EQH3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vps35Q9EQH3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vps35Q9EQH3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vps35Q9EQH3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.43■■□□□ 1.02
Vps35Q9EQH3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vps35Q9EQH3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.43■■□□□ 1.02
Vps35Q9EQH3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Vps35Q9EQH3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Vps35Q9EQH3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Vps35Q9EQH3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
Vps35Q9EQH3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vps35Q9EQH3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vps35Q9EQH3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Vps35Q9EQH3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.41■■□□□ 1.02
Vps35Q9EQH3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps35Q9EQH3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms