Protein–RNA interactions for Protein: Q9D0P8

Ift27, Intraflagellar transport protein 27 homolog, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27Q9D0P8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ift27Q9D0P8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Ift27Q9D0P8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ift27Q9D0P8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.67■□□□□ 0.74
Ift27Q9D0P8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Ift27Q9D0P8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ift27Q9D0P8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ift27Q9D0P8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ift27Q9D0P8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ift27Q9D0P8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ift27Q9D0P8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ift27Q9D0P8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ift27Q9D0P8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.66■□□□□ 0.74
Ift27Q9D0P8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ift27Q9D0P8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ift27Q9D0P8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ift27Q9D0P8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ift27Q9D0P8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Ift27Q9D0P8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ift27Q9D0P8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ift27Q9D0P8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ift27Q9D0P8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Ift27Q9D0P8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ift27Q9D0P8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ift27Q9D0P8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ift27Q9D0P8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ift27Q9D0P8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.63■□□□□ 0.73
Ift27Q9D0P8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ift27Q9D0P8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ift27Q9D0P8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ift27Q9D0P8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ift27Q9D0P8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ift27Q9D0P8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ift27Q9D0P8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ift27Q9D0P8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Ift27Q9D0P8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ift27Q9D0P8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ift27Q9D0P8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ift27Q9D0P8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ift27Q9D0P8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ift27Q9D0P8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ift27Q9D0P8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ift27Q9D0P8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ift27Q9D0P8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ift27Q9D0P8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ift27Q9D0P8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ift27Q9D0P8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ift27Q9D0P8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ift27Q9D0P8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ift27Q9D0P8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ift27Q9D0P8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ift27Q9D0P8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ift27Q9D0P8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ift27Q9D0P8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ift27Q9D0P8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ift27Q9D0P8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Ift27Q9D0P8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ift27Q9D0P8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ift27Q9D0P8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.59■□□□□ 0.73
Ift27Q9D0P8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ift27Q9D0P8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ift27Q9D0P8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ift27Q9D0P8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ift27Q9D0P8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ift27Q9D0P8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Ift27Q9D0P8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ift27Q9D0P8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ift27Q9D0P8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ift27Q9D0P8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.58■□□□□ 0.72
Ift27Q9D0P8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ift27Q9D0P8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ift27Q9D0P8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ift27Q9D0P8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ift27Q9D0P8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ift27Q9D0P8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ift27Q9D0P8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ift27Q9D0P8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ift27Q9D0P8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ift27Q9D0P8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ift27Q9D0P8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ift27Q9D0P8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ift27Q9D0P8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.55■□□□□ 0.72
Ift27Q9D0P8 Nkain2-201ENSMUST00000092602 558 ntBASIC19.55■□□□□ 0.72
Ift27Q9D0P8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ift27Q9D0P8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ift27Q9D0P8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ift27Q9D0P8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ift27Q9D0P8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.54■□□□□ 0.72
Ift27Q9D0P8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ift27Q9D0P8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ift27Q9D0P8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ift27Q9D0P8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ift27Q9D0P8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ift27Q9D0P8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ift27Q9D0P8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ift27Q9D0P8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ift27Q9D0P8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ift27Q9D0P8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Ift27Q9D0P8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ift27Q9D0P8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms